VIRsiRNAdb

../../tmp/servers/virsirnadb/1516516056
Result for your query siRNA sequence

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	Strain name	Start	Alignment	End	% Identity
Query	virsi1832	1	`ggctgcttatggtgacaat`	19
X04468.1	Poliovirus type 3 strain 23127 complete genome	582	`...................`	600	100
X00595.1	Poliovirus type 2 genome (strain Sabin 2 (P712, Ch, 2ab))	579	`...................`	597	100
X00596.1	Poliovirus type 3 mRNA (vaccine strain Sabin 3 (Leon 12a1b))	583	`...................`	601	100
X00596.1	Poliovirus type 3 mRNA (vaccine strain Sabin 3 (Leon 12a1b))	6951	`___...c.........g..`	6966	73
X00925.1	Poliovirus type 3 leon 12 a1b sequence (P3/Leon 12 a1b)	581	`...................`	599	100
X00925.1	Poliovirus type 3 leon 12 a1b sequence (P3/Leon 12 a1b)	6949	`___...c.........g..`	6964	73
V01148.1	Genome of human poliovirus type 1 (Mahoney strain). (One of two versi	576	`...................`	594	100
V01150.1	Human poliovirus strain Sabin 1 complete genome, strain Sabin 1	578	`...................`	596	100
D90457.1	CXA24CG Human coxsackievirus A24 DNA, complete genome	586	`...................`	604	100
D00625.1	POL2CG1 Human poliovirus 2 genomic RNA, complete genome	583	`...................`	601	100
M12197.1	POL2LAN Poliovirus type 2 (Lansing strain), complete genome	583	`...................`	601	100
K01392.1	POL3L37 Poliovirus P3/Leon/37 (type 3), complete genome	581	`...................`	599	100
K01392.1	POL3L37 Poliovirus P3/Leon/37 (type 3), complete genome	6949	`___...c.........g..`	6964	73
AJ132960.1	Human poliovirus 1, complete genome. Isolated from faeces of immunode	579	`...................`	597	100
AJ132961.1	Human poliovirus 1, complete genome. Isolated from an immunodeficient	579	`...................`	597	100
AJ293918.1	Human poliovirus type 3 complete genome, live-attenuated strain USOL-	583	`...................`	601	100
AJ416942.1	Human poliovirus 1 genomic RNA for polyprotein, strain CHAT 10A-11	578	`...................`	596	100
AF462418.1	Human poliovirus 1 99/056-252-14, complete genome	578	`...................`	596	100
AF462419.1	Human poliovirus 1 RUS-1161-96-001, complete genome	578	`...................`	596	100
AJ430385.1	Human poliovirus 1 genomic RNA for polyprotein gene, strain Cox	578	`...................`	596	100
AF405666.1	Human poliovirus 1 isolate HAI01007, complete genome	578	`...................`	596	100
AF405669.1	Human poliovirus 1 isolate HAI00003, complete genome	578	`...................`	596	100
AF405682.1	Human poliovirus 1 isolate DOR00041C1, complete genome	578	`...................`	596	100
AF405690.1	Human poliovirus 1 isolate DOR00013, complete genome	578	`...................`	596	100
AY184219.1	Human poliovirus 1 strain Sabin 1, complete genome	578	`...................`	596	100
AY184220.1	Human poliovirus 2 strain Sabin 2, complete genome	579	`...................`	597	100
AY184221.1	Human poliovirus 3 strain Sabin 3, complete genome	581	`...................`	599	100
AY184221.1	Human poliovirus 3 strain Sabin 3, complete genome	6949	`___...c.........g..`	6964	73
AF541919.1	Human poliovirus 3 isolate PV3/NOR/01/8 polyprotein mRNA, complete cd	571	`...................`	589	100
AF541919.1	Human poliovirus 3 isolate PV3/NOR/01/8 polyprotein mRNA, complete cd	6939	`___...c.........g..`	6954	73
AY238473.1	Human poliovirus 2 strain MEF-1 polyprotein gene, complete cds	583	`...................`	601	100
AY177685.1	Human poliovirus 2, complete genome	579	`...................`	597	100
AY278549.1	Human poliovirus 2 isolate P2S/Mog65-3 (20120), complete genome	579	`...................`	597	100
AY278550.1	Human poliovirus 2 isolate P2S/Mog65-1 (20003), complete genome	579	`...................`	597	100
AY278551.1	Human poliovirus 2 isolate P2S/Mog66-4 (21043), complete genome	579	`...................`	597	100
AY278552.1	Human poliovirus 2 isolate P2S/Mog65-2 (20077), complete genome	579	`...................`	597	100
AY278553.1	Human poliovirus 1 isolate P1W/Bar65 (19276), complete genome	582	`...................`	600	100
AF448782.1	Human poliovirus 2 strain EGY88-074, complete genome	583	`...................`	601	100
AF448782.1	Human poliovirus 2 strain EGY88-074, complete genome	6957	`___............tg..`	6972	73
AF448783.1	Human poliovirus 2 strain EGY93-034, complete genome	585	`...................`	603	100
AF499636.1	Human coxsackievirus A11 strain Belgium-1, complete genome	582	`...................`	600	100
AF499637.1	Human coxsackievirus A13 strain Flores, complete genome	581	`...................`	599	100
AF499638.1	Human coxsackievirus A15 strain G9, complete genome	584	`...................`	602	100
AF499639.1	Human coxsackievirus A17 strain G12, complete genome	583	`...................`	601	100
AF499639.1	Human coxsackievirus A17 strain G12, complete genome	6976	`____..c.........g..`	6990	68
AF499640.1	Human coxsackievirus A18 strain G13, complete genome	580	`...................`	598	100
AF499641.1	Human coxsackievirus A19 strain 8663, complete genome	581	`...................`	599	100
AF499642.1	Human coxsackievirus A20 strain IH35, complete genome	580	`...................`	598	100
AF499643.1	Human coxsackievirus A22 strain Chulman, complete genome	580	`...................`	598	100
AF546702.1	Human coxsackievirus A21 strain Kuykendall, complete genome	578	`...................`	596	100
AF416342.1	Human poliovirus 1 isolate HAI01-013, complete genome	578	`...................`	596	100
AF458333.1	Human poliovirus 1 isolate HAI01015, complete genome	578	`...................`	596	100
AF465511.1	Human coxsackievirus A13 strain Flores, complete genome	581	`...................`	599	100
AF465512.1	Human coxsackievirus A15 strain G-9, complete genome	584	`...................`	602	100
AF465513.1	Human coxsackievirus A18 strain G-13, complete genome	580	`...................`	598	100
AF465514.1	Human coxsackievirus A20 strain IH Pool 35, complete genome	580	`...................`	598	100
AF465515.1	Human coxsackievirus A21 strain Kuykendall, complete genome	578	`...................`	596	100
AF538840.1	Human poliovirus 1 isolate TCDCE01-135, complete genome	578	`...................`	596	100
AF538841.1	Human poliovirus 1 isolate TCDC01-113, complete genome	578	`...................`	596	100
AF538842.1	Human poliovirus 1 isolate TCDC01-330, complete genome	578	`...................`	596	100
AF538843.1	Human poliovirus 1 isolate TCDC01-861, complete genome	578	`...................`	596	100
AF111953.2	Human poliovirus 1 isolate CHN-Hebei/91-2, complete genome	581	`...................`	599	100
AF111961.2	Human poliovirus 1 isolate CHN-Guangdong/92-2, complete genome	581	`...................`	599	100
AF111966.2	Human poliovirus 1 isolate CHN-Hainan/93-2, complete genome	581	`...................`	599	100
AF111966.2	Human poliovirus 1 isolate CHN-Hainan/93-2, complete genome	5677	`__..ct...a.........`	5661	73
AF111981.2	Human poliovirus 1 isolate CHN-Fujian/93-8, complete genome	581	`...................`	599	100
AF111982.2	Human poliovirus 1 isolate CHN-Yunnan/92, complete genome	581	`...................`	599	100
AF111983.3	Human poliovirus 1 isolate CHN-Henan/91-3, complete genome	581	`...................`	599	100
AJ544513.1	Human poliovirus 2 gene for polyprotein, genomic RNA, isolate 102050	579	`...................`	597	100
AY560657.1	Human poliovirus 1 strain Brunhilde, complete genome	582	`...................`	600	100
AF111984.2	Human poliovirus 1 isolate CHN-Jiangxi/89-1, complete genome	581	`...................`	599	100
AB180070.1	Human poliovirus 1 gene for polyprotein, complete cds, isolate:Mindan	578	`...................`	596	100
AB180071.1	Human poliovirus 1 gene for polyprotein, complete cds, isolate:Luzon-	578	`...................`	596	100
AB180072.1	Human poliovirus 1 gene for polyprotein, complete cds, isolate:Luzon-	578	`...................`	596	100
AB180073.1	Human poliovirus 1 gene for polyprotein, complete cds, isolate:Luzon-	578	`...................`	596	100
AY876912.1	Human enterovirus Ningbo3-02, complete genome	581	`...................`	599	100
AY876913.1	Human enterovirus Hangzhou13-02, complete genome	581	`...................`	599	100
AY928384.1	Human poliovirus 1 isolate d224-2002037606 polyprotein gene, complete	578	`...................`	596	100
AY928385.1	Human poliovirus 1 isolate d054-2002037604 polyprotein gene, complete	578	`...................`	596	100
AY928386.1	Human poliovirus 1 isolate d179-2002037605 polyprotein gene, complete	578	`...................`	596	100
AY928387.1	Human poliovirus 1 isolate d018-2002037602 polyprotein gene, complete	578	`...................`	596	100
AY948201.1	Human poliovirus 2 isolate CHN1025 polyprotein gene, complete cds	580	`...................`	598	100
AM040035.1	Human poliovirus 2 complete virion genome, isolate PV2/4568-1/ISR98	483	`...................`	501	100
AM040036.1	Human poliovirus 2 complete virion genome, isolate PV2/5021-1/ISR99	483	`...................`	501	100
AM040037.1	Human poliovirus 2 complete virion genome, isolate PV2/5074-18/ISR99	483	`...................`	501	100
AM040038.1	Human poliovirus 2 complete virion genome, isolate PV2/5104-1/ISR99	483	`...................`	501	100
AM040039.1	Human poliovirus 2 complete virion genome, isolate PV2/5116-9/ISR99	483	`...................`	501	100
AB205395.1	Human enterovirus C genomic RNA, complete genome, strain: Cambodia-02	581	`...................`	599	100
AB205395.1	Human enterovirus C genomic RNA, complete genome, strain: Cambodia-02	6949	`___............tg..`	6964	73
AB205396.1	Human coxsackievirus A18 genomic RNA, complete genome, strain: CAM197	583	`...................`	601	100
DQ205099.1	Human poliovirus 2 clone S2R9, complete genome	579	`...................`	597	100
DQ358078.1	Human coxsackievirus A20 serotype CAV20a, complete genome	585	`...................`	603	100
DQ443001.1	Human coxsackievirus A24 isolate DSO-52/2005, complete genome	586	`...................`	604	100
DQ443002.1	Human coxsackievirus A24 isolate DSO-26/2005, complete genome	586	`...................`	604	100
AM084223.1	Human poliovirus 2 RNA for polyprotein, complete genome, genomic RNA,	579	`...................`	597	100
AM084224.1	Human poliovirus 2 RNA for polyprotein, complete genome, genomic RNA,	579	`...................`	597	100
AM084225.1	Human poliovirus 2 RNA for polyprotein, complete genome, genomic RNA,	579	`...................`	597	100
DQ890385.1	Human poliovirus 2 strain NIE0210766, complete genome	579	`...................`	597	100
DQ890386.1	Human poliovirus 2 strain NIE0110767, complete genome	581	`...................`	599	100
DQ890387.1	Human poliovirus 2 strain USA9810768, complete genome	579	`...................`	597	100
DQ890388.1	Human poliovirus 2 strain PER8310769, complete genome	579	`...................`	597	100
DQ890388.1	Human poliovirus 2 strain PER8310769, complete genome	6958	`____..c.........g..`	6972	68
EF026081.1	Human coxsackievirus A24 strain Joseph, complete genome	581	`...................`	599	100
EF026081.1	Human coxsackievirus A24 strain Joseph, complete genome	2753	`______...........__`	2743	57
EF015886.1	Human enterovirus 96 strain BAN00-10488, complete genome	582	`...................`	600	100
EF015886.1	Human enterovirus 96 strain BAN00-10488, complete genome	1049	`..t..g.........____`	1063	68
EF456707.1	Human poliovirus 3 isolate K/2002 polyprotein gene, complete cds	541	`...................`	559	100
EF555644.1	Human enterovirus 99, complete genome	582	`...................`	600	100
EF555645.1	Human enterovirus 102, complete genome	581	`...................`	599	100
EF555645.1	Human enterovirus 102, complete genome	1048	`..t..........c.____`	1062	68
EF682343.1	Human poliovirus 1 strain USA10774 polyprotein gene, complete cds	552	`...................`	570	100
EF682344.1	Human poliovirus 1 strain USA10775 polyprotein gene, complete cds	552	`...................`	570	100
EF682345.1	Human poliovirus 1 strain USA10773 polyprotein gene, complete cds	552	`...................`	570	100
EF682346.1	Human poliovirus 1 strain USA10780 polyprotein gene, complete cds	552	`...................`	570	100
EF682347.1	Human poliovirus 1 strain USA10781 polyprotein gene, complete cds	552	`...................`	570	100
EF682348.1	Human poliovirus 1 strain USA10782 polyprotein gene, complete cds	552	`...................`	570	100
EF682349.1	Human poliovirus 1 strain USA10771 polyprotein gene, complete cds	552	`...................`	570	100
EF682350.1	Human poliovirus 1 strain USA10772 polyprotein gene, complete cds	552	`...................`	570	100
EF682351.1	Human poliovirus 1 strain USA10778 polyprotein gene, complete cds	552	`...................`	570	100
EF682352.1	Human poliovirus 1 strain USA10770 polyprotein gene, complete cds	552	`...................`	570	100
EF682353.1	Human poliovirus 1 strain USA10777 polyprotein gene, complete cds	552	`...................`	570	100
EF682354.1	Human poliovirus 1 strain USA10779 polyprotein gene, complete cds	552	`...................`	570	100
EF682355.1	Human poliovirus 1 strain USA10776 polyprotein gene, complete cds	552	`...................`	570	100
EF682356.1	Human poliovirus 1 strain USA10784, complete genome	578	`...................`	596	100
EF682357.1	Human poliovirus 1 strain USA10785, complete genome	578	`...................`	596	100
EF682358.1	Human poliovirus 1 strain USA10783, complete genome	578	`...................`	596	100
EF682359.1	Human poliovirus 1 strain USA10786, complete genome	578	`...................`	596	100
AM884184.1	Human poliovirus 2, complete genome, genomic RNA, isolate VDPV MAD005	579	`...................`	597	100
AM884185.1	Human poliovirus 2, complete genome, genomic RNA, isolate VDPV MAD006	579	`...................`	597	100
EU794953.1	Human poliovirus 1 isolate A21 polyprotein gene, complete cds	530	`...................`	548	100
EU794954.1	Human poliovirus 1 isolate A49 polyprotein gene, complete cds	530	`...................`	548	100
EU794955.1	Human poliovirus 1 isolate A63 polyprotein gene, complete cds	530	`...................`	548	100
EU794956.1	Human poliovirus 1 isolate A84 polyprotein gene, complete cds	530	`...................`	548	100
EU794957.1	Human poliovirus 1 isolate A88 polyprotein gene, complete cds	530	`...................`	548	100
EU794958.1	Human poliovirus 1 isolate A91 polyprotein gene, complete cds	530	`...................`	548	100
EU794959.1	Human poliovirus 1 isolate A102 polyprotein gene, complete cds	530	`...................`	548	100
EU794960.1	Human poliovirus 1 isolate A105 polyprotein gene, complete cds	530	`...................`	548	100
EU794961.1	Human poliovirus 1 isolate A118 polyprotein gene, complete cds	530	`...................`	548	100
EU794962.1	Human poliovirus 1 isolate A199 polyprotein gene, complete cds	530	`...................`	548	100
EU794963.1	Human poliovirus 1 isolate A449 polyprotein gene, complete cds	530	`...................`	548	100
EU794964.1	Human poliovirus 1 isolate A649 polyprotein gene, complete cds	530	`...................`	548	100
FM955278.1	Human coxsackievirus A17, complete genome, genomic RNA, isolate cCA17	583	`...................`	601	100
FJ769378.1	Human poliovirus 1 strain CHN8184/GZ/CHN/2004, complete genome	578	`...................`	596	100
FJ769379.1	Human poliovirus 1 strain CHN8229-1/GZ/CHN/2004, complete genome	578	`...................`	596	100
FJ769380.1	Human poliovirus 1 strain CHN8229-2/GZ/CHN/2004, complete genome	578	`...................`	596	100
FJ769381.1	Human poliovirus 1 strain CHN8229-3/GZ/CHN/2004, complete genome	578	`...................`	596	100
FJ769382.1	Human poliovirus 1 strain CHN8233c/GZ/CHN/2004, complete genome	578	`...................`	596	100
FJ769383.1	Human poliovirus 1 strain CHN8225c/GZ/CHN/2004, complete genome	578	`...................`	596	100
FJ769384.1	Human poliovirus 1 strain CHN8248c/GZ/CHN/2004, complete genome	578	`...................`	596	100
FJ769385.1	Human poliovirus 1 strain CHN8264c/GZ/CHN/2004, complete genome	578	`...................`	596	100
FJ898290.1	Human poliovirus 2 strain Sabine 2 isolate CHN3024/HN/CHN/1999, compl	579	`...................`	597	100
FJ859058.1	Human poliovirus 1 isolate 10050, complete genome	578	`...................`	596	100
FJ859058.1	Human poliovirus 1 isolate 10050, complete genome	6958	`___...c.........g..`	6973	73
FJ859059.1	Human poliovirus 1 isolate 10086c, complete genome	578	`...................`	596	100
FJ859059.1	Human poliovirus 1 isolate 10086c, complete genome	6958	`___...c.........g..`	6973	73
FJ859060.1	Human poliovirus 1 isolate 10091c, complete genome	578	`...................`	596	100
FJ859060.1	Human poliovirus 1 isolate 10091c, complete genome	6958	`___...c.........g..`	6973	73
FJ859061.1	Human poliovirus 1 isolate 10092c, complete genome	578	`...................`	596	100
FJ859061.1	Human poliovirus 1 isolate 10092c, complete genome	6958	`___...c.........g..`	6973	73
FJ859062.1	Human poliovirus 1 isolate 10094c, complete genome	578	`...................`	596	100
FJ859062.1	Human poliovirus 1 isolate 10094c, complete genome	6958	`___.............g..`	6973	78
FJ859063.1	Human poliovirus 1 isolate 10095c, complete genome	578	`...................`	596	100
FJ859063.1	Human poliovirus 1 isolate 10095c, complete genome	6958	`___...c.........g..`	6973	73
FJ859064.1	Human poliovirus 1 isolate 10097c, complete genome	578	`...................`	596	100
FJ859064.1	Human poliovirus 1 isolate 10097c, complete genome	6958	`___.............g..`	6973	78
FJ914252.2	Human poliovirus 3 strain SWI10947, complete genome	582	`...................`	600	100
HM107832.1	Human poliovirus 2 isolate CHN1054, complete genome	579	`...................`	597	100
HM107832.1	Human poliovirus 2 isolate CHN1054, complete genome	6957	`___...c.........g..`	6972	73
HM107833.1	Human poliovirus 2 isolate CHN1078, complete genome	579	`...................`	597	100
HM107833.1	Human poliovirus 2 isolate CHN1078, complete genome	6957	`___...c.........g..`	6972	73
HM107834.1	Human poliovirus 2 isolate CHN3219, complete genome	579	`...................`	597	100
HM107834.1	Human poliovirus 2 isolate CHN3219, complete genome	6957	`___...c.........g..`	6972	73
HM107835.1	Human poliovirus 2 isolate CHN8316, complete genome	579	`...................`	597	100
X67706.1	Coxsackievirus B5 complete genome	584	`...................`	602	100
X67706.1	Coxsackievirus B5 complete genome	6888	`____............g._`	6901	68
X05690.1	Coxsackievirus B4 complete genome	584	`...................`	602	100
D00627.1	CXA9CG Human coxsackievirus A9 genomic RNA, complete genome, strain: G	584	`...................`	602	100
D00627.1	CXA9CG Human coxsackievirus A9 genomic RNA, complete genome, strain: G	6935	`___.............g..`	6950	78
M33854.1	CXA3CG Coxsackievirus B3 (CVB3) complete genome	582	`...................`	600	100
M16572.1	CXA3G Coxsackievirus B3, complete genome	581	`...................`	599	100
M88483.1	CXAB3CG Coxsackievirus B3 mRNA, complete genome	583	`...................`	601	100
X80059.1	Echo Virus 11 genomic DNA	585	`...................`	603	100
X84981.1	Echovirus 9 (strain Hill), complete genome	580	`...................`	598	100
X84981.1	Echovirus 9 (strain Hill), complete genome	6907	`___.............g..`	6922	78
U16283.1	E6U16283 Echovirus 6 lytic strain, complete genome	582	`...................`	600	100
U16283.1	E6U16283 Echovirus 6 lytic strain, complete genome	6903	`___............tg..`	6918	73
S76772.1	polyprotein [Coxsackie B4 virus CB4, host=mice, E2, originally derive	585	`...................`	603	100
X92886.1	Echovirus 9 (strain Barty), complete genome	581	`...................`	599	100
U57056.1	CXU57056 Coxsackievirus B3 Woodruff variant, complete genome	583	`...................`	601	100
U57056.1	CXU57056 Coxsackievirus B3 Woodruff variant, complete genome	6886	`___.............g..`	6901	78
X79047.1	Echovirus type 12, prototype Travis wild type genome	582	`...................`	600	100
X77708.1	Echovirus type 12, prototype Travis complete RNA genome	582	`...................`	600	100
AF039205.1	Coxsackievirus B6 strain Schmitt, complete genome	584	`...................`	602	100
AF083069.1	Echovirus 5, complete genome	583	`...................`	601	100
AF085363.1	Coxsackievirus B2 strain Ohio-1 polyprotein gene, complete cds	583	`...................`	601	100
AF085363.1	Coxsackievirus B2 strain Ohio-1 polyprotein gene, complete cds	6892	`___...a.........g..`	6907	73
AF162711.1	Echovirus 30 strain Bastianni, complete genome	585	`...................`	603	100
AF162711.1	Echovirus 30 strain Bastianni, complete genome	6922	`____...........____`	6932	57
AF081485.1	Coxsackievirus B2 strain Ohio, complete genome	583	`...................`	601	100
AF081485.1	Coxsackievirus B2 strain Ohio, complete genome	6892	`___...a.........g..`	6907	73
AF105342.1	Coxsackievirus B6 strain Schmitt, complete genome	584	`...................`	602	100
AF114383.1	Coxsackievirus B5 strain Faulkner, complete genome	583	`...................`	601	100
AF114383.1	Coxsackievirus B5 strain Faulkner, complete genome	6886	`___...a.........g._`	6900	68
AF114384.1	Coxsackievirus B6 strain Schmitt, complete genome	583	`...................`	601	100
AF230973.1	AF230973 Enterovirus Yanbian 96-83csf, complete genome	589	`...................`	607	100
AF230973.1	AF230973 Enterovirus Yanbian 96-83csf, complete genome	3671	`__.c..cc...........`	3655	73
AF231763.1	Coxsackievirus B3 strain 31-1-93, complete genome	583	`...................`	601	100
AF231764.1	Coxsackievirus B3 strain P, complete genome	583	`...................`	601	100
AF231765.1	Coxsackievirus B3 strain PD, complete genome	583	`...................`	601	100
AF241359.1	Enterovirus CA55-1988, complete genome	585	`...................`	603	100
AY036578.1	Human echovirus 7 strain UMMC polyprotein gene, complete cds	582	`...................`	600	100
AY036578.1	Human echovirus 7 strain UMMC polyprotein gene, complete cds	6912	`___............tg..`	6927	73
AY036579.1	Human echovirus 7 strain Wallace polyprotein gene, complete cds	583	`...................`	601	100
AY036579.1	Human echovirus 7 strain Wallace polyprotein gene, complete cds	6913	`___...a.........g..`	6928	73
AF311938.1	Human echovirus 30 strain Bastianni, complete genome	590	`...................`	608	100
AF311938.1	Human echovirus 30 strain Bastianni, complete genome	6927	`____...........____`	6937	57
AF311939.1	Human coxsackievirus B4 strain E2 variant, complete genome	585	`...................`	603	100
AF317694.1	Human echovirus 18 strain Metcalf polyprotein gene, complete cds	581	`...................`	599	100
AF317694.1	Human echovirus 18 strain Metcalf polyprotein gene, complete cds	6896	`___...a.........g..`	6911	73
AJ276224.1	Human echovirus 11 genomic RNA for polyprotein	583	`...................`	601	100
AF328683.1	Human coxsackievirus B4 polyprotein-like gene, complete sequence	583	`...................`	601	100
AF524866.1	Human echovirus 9 strain Barty, complete genome	583	`...................`	601	100
AF524867.1	Human echovirus 9 isolate DM, complete genome	583	`...................`	601	100
AY186745.1	Human coxsackievirus B1 clone pMP1.24 polyprotein gene, complete cds	563	`...................`	581	100
AY186746.1	Human coxsackievirus B1 clone pMP1.23 polyprotein gene, complete cds	563	`...................`	581	100
AY186747.1	Human coxsackievirus B1 clone pAMP2.17 polyprotein gene, complete cds	563	`...................`	581	100
AY186748.1	Human coxsackievirus B1 clone pAMP2.22 polyprotein gene, complete cds	563	`...................`	581	100
AJ493062.2	Human enterovirus 77 gene for polyprotein, genomic RNA, isolate CF496	583	`...................`	601	100
AF465516.1	Human echovirus 7 strain Wallace, complete genome	583	`...................`	601	100
AF465516.1	Human echovirus 7 strain Wallace, complete genome	6913	`___...a.........g..`	6928	73
AF465517.1	Human echovirus 6 strain Charles, complete genome	583	`...................`	601	100
AF465517.1	Human echovirus 6 strain Charles, complete genome	6904	`___............tg..`	6919	73
AF465518.1	Human echovirus 2 strain Cornelis, complete genome	582	`...................`	600	100
AY302539.1	Human echovirus 13 strain Del Carmen complete genome	583	`...................`	601	100
AY302540.1	Human echovirus 14 strain Tow complete genome	582	`...................`	600	100
AY302540.1	Human echovirus 14 strain Tow complete genome	6936	`___...a.........g..`	6951	73
AY302541.1	Human echovirus 15 strain CH 96-51 complete genome	584	`...................`	602	100
AY302541.1	Human echovirus 15 strain CH 96-51 complete genome	6923	`___.............g..`	6938	78
AY302542.1	Human echovirus 16 strain Harrington complete genome	583	`...................`	601	100
AY302543.1	Human echovirus 17 strain CHHE-29 complete genome	584	`...................`	602	100
AY302543.1	Human echovirus 17 strain CHHE-29 complete genome	3688	`________...........`	3678	57
AY302545.1	Human echovirus 2 strain Cornelis complete genome	582	`...................`	600	100
AY302546.1	Human echovirus 20 strain JV-1 complete genome	583	`...................`	601	100
AY302547.1	Human echovirus 21 strain Farina complete genome	582	`...................`	600	100
AY302547.1	Human echovirus 21 strain Farina complete genome	6912	`___.............g..`	6927	78
AY302548.1	Human echovirus 24 strain DeCamp complete genome	583	`...................`	601	100
AY302548.1	Human echovirus 24 strain DeCamp complete genome	3353	`_..........tg.g..._`	3369	73
AY302549.1	Human echovirus 25 strain JV-4 complete genome	582	`...................`	600	100
AY302550.1	Human echovirus 26 strain Coronel complete genome	582	`...................`	600	100
AY302551.1	Human echovirus 27 strain Bacon complete genome	585	`...................`	603	100
AY302552.1	Human echovirus 29 strain JV-10 complete genome	583	`...................`	601	100
AY302552.1	Human echovirus 29 strain JV-10 complete genome	3699	`________...........`	3689	57
AY302553.1	Human echovirus 3 strain Morrisey complete genome	584	`...................`	602	100
AY302554.1	Human echovirus 31 strain Caldwell complete genome	582	`...................`	600	100
AY302555.1	Human echovirus 32 strain PR-10 complete genome	573	`...................`	591	100
AY302556.1	Human echovirus 33 strain Toluca-3 complete genome	583	`...................`	601	100
AY302557.1	Human echovirus 4 strain Pesacek complete genome	583	`...................`	601	100
AY302557.1	Human echovirus 4 strain Pesacek complete genome	6880	`___.............g..`	6895	78
AY302558.1	Human echovirus 6 strain D'Amori complete genome	583	`...................`	601	100
AY302558.1	Human echovirus 6 strain D'Amori complete genome	6904	`___............tg..`	6919	73
AY302559.1	Human echovirus 7 strain Wallace complete genome	583	`...................`	601	100
AY302559.1	Human echovirus 7 strain Wallace complete genome	6913	`___...a.........g..`	6928	73
AY302560.1	Enterovirus 69 strain Toluca-1 complete genome	585	`...................`	603	100
AY556057.1	Enterovirus 74 strain USA/CA75-10213, complete genome	583	`...................`	601	100
AY556070.1	Enterovirus 75 strain USA/OK85-10362, complete genome	588	`...................`	606	100
AJ577589.1	Human echovirus 11, isolate HUN-1108, complete virion genome	585	`...................`	603	100
AJ577590.1	Human echovirus 11, isolate FIN-0666, complete virion genome	585	`...................`	603	100
AJ577594.1	Human echovirus 11, isolate ROU-9191, complete virion genome	585	`...................`	603	100
AY673831.1	Human coxsackievirus B3 strain GA, complete genome	584	`...................`	602	100
AY673831.1	Human coxsackievirus B3 strain GA, complete genome	6887	`___............tg..`	6902	73
AY752946.1	Human coxsackievirus B3 strain 20, complete genome	583	`...................`	601	100
AY896762.1	Human enterovirus B strain CBV3-11059-99 from Uzbekistan polyprotein	563	`...................`	581	100
AY896762.1	Human enterovirus B strain CBV3-11059-99 from Uzbekistan polyprotein	6867	`____...........tg..`	6881	68
AY896765.1	Human enterovirus B strain EV7-15936-01 from Azerbaijan polyprotein g	559	`...................`	577	100
AY843297.1	Human enterovirus 79 strain USA/CA79-10384, complete genome	586	`...................`	604	100
AY843298.1	Human enterovirus 80 strain USA/CA67-10387, complete genome	584	`...................`	602	100
AY843298.1	Human enterovirus 80 strain USA/CA67-10387, complete genome	6915	`____..g.........g..`	6929	68
AY843299.1	Human enterovirus 81 strain USA/CA68-10389, complete genome	580	`...................`	598	100
AY843299.1	Human enterovirus 81 strain USA/CA68-10389, complete genome	6902	`____..a.........g..`	6916	68
AY843300.1	Human enterovirus 82 strain USA/CA64-10390, complete genome	586	`...................`	604	100
AY843301.1	Human enterovirus 83 strain USA/CA76-10392, complete genome	583	`...................`	601	100
AY843302.1	Human enterovirus 77 strain USA/TX97-10394, complete genome	590	`...................`	608	100
AY843303.1	Human enterovirus 85 strain BAN00-10353, complete genome	583	`...................`	601	100
AY843304.1	Human enterovirus 86 strain BAN00-10354, complete genome	583	`...................`	601	100
AY843305.1	Human enterovirus 87 strain BAN01-10396, complete genome	584	`...................`	602	100
AY843306.1	Human enterovirus 88 strain BAN01-10398, complete genome	585	`...................`	603	100
AY843307.1	Human enterovirus 97 strain BAN99-10355, complete genome	583	`...................`	601	100
AY843307.1	Human enterovirus 97 strain BAN99-10355, complete genome	3684	`________...........`	3674	57
AY843308.1	Human enterovirus 101 strain CIV03-10361, complete genome	583	`...................`	601	100
AJ849942.1	Human echovirus 3 gene for polyprotein, genomic RNA, strain PicoBank/	583	`...................`	601	100
DQ246620.1	Human echovirus 30 strain Echo30/Zhejiang/17/03/CSF, complete genome	584	`...................`	602	100
DQ246620.1	Human echovirus 30 strain Echo30/Zhejiang/17/03/CSF, complete genome	6914	`___............tg..`	6929	73
DQ480420.1	Human coxsackievirus B4 strain Tuscany, complete genome	584	`...................`	602	100
DQ534205.1	Human echovirus 30 isolate 14916net87, complete genome	585	`...................`	603	100
DQ902712.1	Human enterovirus 84 isolate CIV2003-10603, complete genome	585	`...................`	603	100
EF174468.1	Human coxsackievirus B2 isolate KOR 04-243, complete genome	583	`...................`	601	100
EF174469.1	Human coxsackievirus B2 isolate KOR 04-279, complete genome	583	`...................`	601	100
EF174469.1	Human coxsackievirus B2 isolate KOR 04-279, complete genome	6892	`___............tg..`	6907	73
EF371880.2	Human enterovirus B isolate SE-03-78616, complete genome	584	`...................`	602	100
EF634316.1	Human echovirus 11 strain D207, complete genome	586	`...................`	604	100
EU147493.1	Human coxsackievirus B1 isolate CVB1Nm polyprotein gene, complete cds	582	`...................`	600	100
EU147493.1	Human coxsackievirus B1 isolate CVB1Nm polyprotein gene, complete cds	6879	`___............____`	6890	63
EU144042.1	Human coxsackievirus B3 isolate CVB3-MCH polyprotein gene, complete c	583	`...................`	601	100
AB426610.1	Human enterovirus 79 genomic RNA, complete genome, strain: NH95-0601	582	`...................`	600	100
AB426611.1	Human enterovirus 97 genomic RNA, complete genome, strain: DT94-0227	583	`...................`	601	100
FJ000001.1	Human coxsackievirus B3 strain Fuyang19, complete genome	582	`...................`	600	100
FJ172447.1	Human echovirus 4 strain AUS250G, complete genome	587	`...................`	605	100
FJ357838.1	Human coxsackievirus B3 strain GZ803, complete genome	585	`...................`	603	100
FJ357838.1	Human coxsackievirus B3 strain GZ803, complete genome	6888	`___...a.........g..`	6903	73
GQ141875.1	Human coxsackievirus B3 strain Beijing0811, complete genome	584	`...................`	602	100
AB501329.1	Human echovirus 13 gene for polyprotein, complete cds, strain: 2002-2	584	`...................`	602	100
AB501332.1	Human echovirus 13 gene for polyprotein, complete cds, strain: S3(1)-	584	`...................`	602	100
HM031191.1	Human echovirus 25 strain HN-2, complete genome	585	`...................`	603	100
AY752944.2	Human coxsackievirus B3 strain 28, complete genome	583	`...................`	601	100
HM185055.1	Human echovirus 6 strain Echo6/Henan/116/2008, complete genome	584	`...................`	602	100
HM185056.1	Human enterovirus B strain EVB/Henan/127/2008, complete genome	561	`...................`	579	100
HM775882.1	Human echovirus 5 isolate Kor06-ECV5-253cn, complete genome	579	`...................`	597	100
HM777023.1	Human echovirus 18 isolate Kor05-ECV18-054cn, complete genome	584	`...................`	602	100
U22521.1	ETU22521 Human enterovirus 71 polyprotein gene, complete cds	584	`...................`	602	100
U22522.1	ETU22522 Human enterovirus 71 polyprotein gene, complete cds	585	`...................`	603	100
AF119795.2	Enterovirus 71 strain TW/2272/98 polyprotein gene, complete cds	582	`...................`	600	100
AF136379.1	Enterovirus 71 isolate NCKU9822 polyprotein mRNA, complete cds	584	`...................`	602	100
AF119796.3	Enterovirus 71 strain TW/2086/98 polyprotein gene, complete cds	582	`...................`	600	100
AF176044.1	Enterovirus 71 polyprotein gene, complete cds	585	`...................`	603	100
AF177911.1	Coxsackievirus A16 polyprotein gene, complete cds	586	`...................`	604	100
AF302996.1	Enterovirus 71 strain SHZH98 polyprotein gene, complete cds	584	`...................`	602	100
AF304457.1	Enterovirus 71 strain Tainan/5746/98 polyprotein mRNA, complete cds	584	`...................`	602	100
AF304458.1	Enterovirus 71 strain Tainan/4643/98 polyprotein mRNA, complete cds	584	`...................`	602	100
AF304459.1	Enterovirus 71 strain Tainan/6092/98 polyprotein mRNA, complete cds	584	`...................`	602	100
AY465356.1	Human enterovirus 71 strain SHZH03, complete genome	581	`...................`	599	100
AY421760.1	Human coxsackievirus A2 strain Fleetwood, complete genome	583	`...................`	601	100
AY421761.1	Human coxsackievirus A3 strain Olson, complete genome	583	`...................`	601	100
AY421761.1	Human coxsackievirus A3 strain Olson, complete genome	2295	`________...........`	2285	57
AY421762.1	Human coxsackievirus A4 strain High Point, complete genome	588	`...................`	606	100
AY421763.1	Human coxsackievirus A5 strain Swartz, complete genome	582	`...................`	600	100
AY421764.1	Human coxsackievirus A6 strain Gdula, complete genome	586	`...................`	604	100
AY421765.1	Human coxsackievirus A7 strain Parker, complete genome	583	`...................`	601	100
AY421766.1	Human coxsackievirus A8 strain Donovan, complete genome	584	`...................`	602	100
AY421767.1	Human coxsackievirus A10 strain Kowalik, complete genome	585	`...................`	603	100
AY421768.1	Human coxsackievirus A12 strain Texas-12, complete genome	586	`...................`	604	100
AY421769.1	Human coxsackievirus A14 strain G-14, complete genome	590	`...................`	608	100
AJ586873.1	Human enterovirus 71 gene for polyprotein, isolate EV71/9/97/SHA89	585	`...................`	603	100
AY773285.1	Human enterovirus 90 isolate F950027, complete genome	584	`...................`	602	100
AY790926.1	Human coxsackievirus A16 strain shzh00-1, complete genome	586	`...................`	604	100
AY697458.1	Human enterovirus 76 polyprotein gene, complete cds	583	`...................`	601	100
AY697459.1	Human enterovirus 89 polyprotein gene, complete cds	583	`...................`	601	100
AY697460.1	Human enterovirus 90 polyprotein gene, complete cds	585	`...................`	603	100
AY697461.1	Human enterovirus 91 polyprotein gene, complete cds	581	`...................`	599	100
AB204852.1	Human enterovirus 71 genomic RNA, complete genome, sub_strain:BrCr-TR	584	`...................`	602	100
AB204853.1	Human enterovirus 71 genomic RNA, complete genome, sub_strain:BrCr-ts	584	`...................`	602	100
AB192877.1	Human enterovirus 90 genomic RNA, complete genome	585	`...................`	603	100
DQ060149.1	Human enterovirus 71 strain pinf7-54A from Taiwan, complete genome	584	`...................`	602	100
DQ133458.1	Human enterovirus 71 strain 984 polyprotein gene, complete cds	581	`...................`	599	100
DQ133459.1	Human enterovirus 71 strain 1235 polyprotein gene, complete cds	581	`...................`	599	100
DQ341354.1	Human enterovirus 71 isolate 3799-SIN-98, complete genome	586	`...................`	604	100
DQ341355.1	Human enterovirus 71 isolate 06-KOR-00, complete genome	583	`...................`	601	100
DQ341356.1	Human enterovirus 71 isolate 03-KOR-00, complete genome	583	`...................`	601	100
DQ341357.1	Human enterovirus 71 isolate 7F-AUS-6-99, complete genome	583	`...................`	601	100
DQ341358.1	Human enterovirus 71 isolate S40221-SAR-00, complete genome	583	`...................`	601	100
DQ341359.1	Human enterovirus 71 isolate S10862-SAR-98, complete genome	583	`...................`	601	100
DQ341360.1	Human enterovirus 71 isolate J115-MAL-01, complete genome	582	`...................`	600	100
DQ341361.1	Human enterovirus 71 isolate 1M-AUS-12-00, complete genome	583	`...................`	601	100
DQ341362.1	Human enterovirus 71 isolate SB12736-SAR-03, complete genome	586	`...................`	604	100
DQ341363.1	Human enterovirus 71 isolate S19841-SAR-03, complete genome	586	`...................`	604	100
DQ341364.1	Human enterovirus 71 isolate 5511-SIN-00, complete genome	586	`...................`	604	100
DQ341366.1	Human enterovirus 71 isolate SB2864-SAR-00, complete genome	585	`...................`	603	100
DQ341367.1	Human enterovirus 71 isolate MY821-3-SAR-97, complete genome	585	`...................`	603	100
DQ381846.1	Human enterovirus 71 strain 6F/AUS/6/99, complete genome	583	`...................`	601	100
DQ452074.1	Human enterovirus 71 strain 804/NO/03, complete genome	584	`...................`	602	100
AM396584.1	Human enterovirus 71 gene for polyprotein, genomic RNA, isolate ENT/P	582	`...................`	600	100
AM396585.1	Human enterovirus 71 gene for polyprotein, genomic RNA, isolate ENT/P	582	`...................`	600	100
AM396586.1	Human enterovirus 71 gene for polyprotein, genomic RNA, isolate EV71/	585	`...................`	603	100
AM396587.1	Human enterovirus 71 gene for polyprotein, genomic RNA, isolate UH1/P	585	`...................`	603	100
AM396588.1	Human enterovirus 71 gene for polyprotein, genomic RNA, isolate EV71/	576	`...................`	594	100
EF063152.1	Human enterovirus 71 strain E2005125-TW polyprotein gene, complete cd	583	`...................`	601	100
EF373575.1	Human enterovirus 71 strain E2002042-TW-CDC polyprotein gene, complet	587	`...................`	605	100
EF373576.1	Human enterovirus 71 strain E2004104-TW-CDC polyprotein gene, complet	581	`...................`	599	100
EF667343.1	Simian enterovirus 46 strain RNM5, complete genome	582	`...................`	600	100
EF667344.1	Human enterovirus 92 strain RJG7, complete genome	582	`...................`	600	100
EU131776.1	Human enterovirus 71 strain N3340-TW-02, complete genome	581	`...................`	599	100
EU262658.1	Human coxsackievirus A16 strain shzh05-1, complete genome	586	`...................`	604	100
AF326764.2	Simian enterovirus 46 strain OM22 (P15), complete genome	581	`...................`	599	100
EU364841.1	Human enterovirus 71 strain 26M/AUS/4/99, complete genome	586	`...................`	604	100
EU376004.1	Human enterovirus 71 26M/AUS/4/99 CHO cell-adapted, complete genome	586	`...................`	604	100
EU376005.1	Human enterovirus 71 26M/AUS/4/99 mouse-adapted, complete genome	586	`...................`	604	100
EU703812.1	Human enterovirus 71 strain EV71/Fuyang.Anhui.P.R.C/17.08/1, complete	581	`...................`	599	100
EU703813.1	Human enterovirus 71 strain EV71/Fuyang.Anhui.P.R.C/17.08/2, complete	581	`...................`	599	100
EU703814.1	Human enterovirus 71 strain EV71/Fuyang.Anhui.P.R.C/17.08/3, complete	581	`...................`	599	100
EU812514.1	Human coxsackievirus A16 strain FY18 from China, complete genome	589	`...................`	607	100
EU812515.1	Human enterovirus 71 strain FY23 from China, complete genome	584	`...................`	602	100
EU864507.1	Human enterovirus 71 isolate EV71/Zhejiang08, complete genome	582	`...................`	600	100
FJ172159.1	Human enterovirus 71 isolate NUH0075/SIN/08, complete genome	544	`...................`	562	100
FJ158600.1	Human enterovirus 71 isolate DTID/ZJU-62, complete genome	581	`...................`	599	100
FJ158601.1	Human enterovirus 71 isolate DTID/ZJU-74, complete genome	581	`...................`	599	100
FJ194964.1	Human enterovirus 71 strain EV71/GDFS/3/2008, complete genome	581	`...................`	599	100
FJ194965.1	Human enterovirus 71 strain EV71/GDSG/17/2008, complete genome	581	`...................`	599	100
FJ198212.1	Human coxsackievirus A16 strain GZ08, complete genome	586	`...................`	604	100
AB469182.1	Human enterovirus 71 gene for polyprotein, complete cds, strain: SK-E	584	`...................`	602	100
AB469183.1	Human enterovirus 71 gene for polyprotein, complete cds, strain: EV71	584	`...................`	602	100
FJ360544.1	Human enterovirus 71 isolate GZ-08-01, complete genome	580	`...................`	598	100
FJ360545.1	Human enterovirus 71 isolate GZ-08-02, complete genome	581	`...................`	599	100
FJ360546.1	Human enterovirus 71 isolate GZ-08-03, complete genome	580	`...................`	598	100
FJ439769.1	Human enterovirus 71 strain Fuyang-0805, complete genome	581	`...................`	599	100
FJ461781.1	Human enterovirus 71 isolate NUH0083/SIN/08, complete genome	550	`...................`	568	100
FJ606447.1	Human enterovirus 71 strain BJ08-Z004-3, complete genome	581	`...................`	599	100
FJ606448.1	Human enterovirus 71 strain BJ08-Z011-4, complete genome	581	`...................`	599	100
FJ606448.1	Human enterovirus 71 strain BJ08-Z011-4, complete genome	6907	`..t.........a...g..`	6925	84
FJ606449.1	Human enterovirus 71 strain BJ08-Z020-1, complete genome	581	`...................`	599	100
FJ606450.1	Human enterovirus 71 strain BJ08-Z025-5, complete genome	581	`...................`	599	100
AB482183.1	Human enterovirus 71 genomic RNA, complete genome, strain: Nagoya	586	`...................`	604	100
FJ713137.1	Human enterovirus 71 strain Shanghai 036-2009, complete genome	583	`...................`	601	100
FJ607334.1	Human enterovirus 71 strain 1/SHENZHEN/08/China/HFMD/2008, complete g	580	`...................`	598	100
FJ607335.1	Human enterovirus 71 strain 4/SHENZHEN/08/China/HFMD/2008, complete g	580	`...................`	598	100
FJ607336.1	Human enterovirus 71 strain 28/SHENZHEN/08/China/HFMD/2008, complete	579	`...................`	597	100
FJ607337.1	Human enterovirus 71 strain 121/SHENZHEN/08/China/HFMD Fatal/2008, co	580	`...................`	598	100
FJ607338.1	Human enterovirus 71 strain 605/SHENZHEN/08/China/HFMD Severe/2008, c	580	`...................`	598	100
GQ892830.1	Human enterovirus 71 strain GX/LZ 08-04/08/CHN, complete genome	581	`...................`	599	100
GQ994988.1	Human enterovirus 71 strain Anhui1-09-China, complete genome	581	`...................`	599	100
GQ994989.1	Human enterovirus 71 strain Chongqing1-09-China, complete genome	582	`...................`	600	100
GQ994990.1	Human enterovirus 71 strain Chongqing2-09-China, complete genome	581	`...................`	599	100
GQ994991.1	Human enterovirus 71 strain Chongqing3-09-China, complete genome	581	`...................`	599	100
GQ994992.1	Human enterovirus 71 strain Henan2-09-China, complete genome	573	`...................`	591	100
GU196833.1	Human enterovirus 71 strain Henan1-09-China polyprotein gene, complet	393	`...................`	411	100
GU366191.1	Human enterovirus 71 strain Henan10-08-China, complete genome	581	`...................`	599	100
GU396280.1	Human enterovirus 71 isolate EV71/Lanzhou01, complete genome	581	`...................`	599	100
GU459070.1	Human enterovirus 71 isolate FY23-K12, complete genome	584	`...................`	602	100
GU459071.1	Human enterovirus 71 isolate FY23-K14, complete genome	581	`...................`	599	100
GU434678.1	Human enterovirus 71 strain EV71-Hubei-09-China, complete genome	584	`...................`	602	100
HM003207.1	Human enterovirus 71 strain 87-2008 Xi'an Shaanxi, complete genome	581	`...................`	599	100
GQ279368.1	Human coxsackievirus A16 strain SZ/HK08-3, complete genome	586	`...................`	604	100
GQ279369.1	Human enterovirus 71 strain SZ/HK08-5, complete genome	581	`...................`	599	100
GQ279370.1	Human enterovirus 71 strain SZ/HK08-6, complete genome	581	`...................`	599	100
GQ279371.1	Human coxsackievirus A16 strain SZ/HK08-7, complete genome	586	`...................`	604	100
HM002484.1	Human enterovirus 71 strain BJ67, complete genome	581	`...................`	599	100
HM002485.1	Human enterovirus 71 strain BJ97, complete genome	581	`...................`	599	100
HM002486.1	Human enterovirus 71 strain BJ110, complete genome	582	`...................`	600	100
HM002487.1	Human enterovirus 71 strain BJ303, complete genome	582	`...................`	600	100
HM002488.1	Human enterovirus 71 strain BJ366, complete genome	581	`...................`	599	100
HM002489.1	Human enterovirus 71 strain BJ398, complete genome	582	`...................`	600	100
HM053669.1	Human enterovirus 71 strain BJ293, complete genome	581	`...................`	599	100
HM053670.1	Human enterovirus 71 strain BJ393, complete genome	581	`...................`	599	100
HM053671.1	Human enterovirus 71 strain BJ462, complete genome	581	`...................`	599	100
HQ189392.1	Human enterovirus 71 isolate HUN/1978, complete genome	586	`...................`	604	100
HQ407557.1	Human enterovirus 71 strain LN009, complete genome	581	`...................`	599	100
HQ407557.1	Human enterovirus 71 strain LN009, complete genome	6907	`..t.........a...g..`	6925	84
AB550332.1	Human enterovirus 71 genomic RNA, complete genome, strain: 1095-org	583	`...................`	601	100
AB550333.1	Human enterovirus 71 genomic RNA, complete genome, strain: 1095-LPS1	583	`...................`	601	100
AB550334.1	Human enterovirus 71 genomic RNA, complete genome, strain: SK-EV006-o	584	`...................`	602	100
AB550335.1	Human enterovirus 71 genomic RNA, complete genome, strain: SK-EV006-L	584	`...................`	602	100
AB550336.1	Human enterovirus 71 genomic RNA, complete genome, strain: C7/Osaka-o	586	`...................`	604	100
AB550337.1	Human enterovirus 71 genomic RNA, complete genome, strain: C7/Osaka-L	586	`...................`	604	100
AB550338.1	Human enterovirus 71 genomic RNA, complete genome, strain: 75-Yamagat	580	`...................`	598	100
AB550339.1	Human enterovirus 71 genomic RNA, complete genome, strain: 75-Yamagat	580	`...................`	598	100
AB550340.1	Human enterovirus 71 genomic RNA, complete genome, strain: KED005-org	583	`...................`	601	100
AB550341.1	Human enterovirus 71 genomic RNA, complete genome, strain: KED005-LPS	583	`...................`	601	100
HQ188292.1	Human enterovirus 71 strain Fuyang-0805a, complete genome	584	`...................`	602	100
HQ426649.1	Human enterovirus 71 strain 2010FJLY008, complete genome	579	`...................`	597	100
HQ325852.1	Human enterovirus 71 strain EV71/HENAN/DC/2010, complete genome	582	`...................`	600	100
AB575911.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 100	520	`...................`	538	100
AB575912.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 108	534	`...................`	552	100
AB575913.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 119	511	`...................`	529	100
AB575914.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 170	520	`...................`	538	100
AB575916.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 161	522	`...................`	540	100
AB575918.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 205	522	`...................`	540	100
AB575923.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 202	528	`...................`	546	100
AB575927.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 113	521	`...................`	539	100
AB575928.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 115	522	`...................`	540	100
AB575935.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 480	527	`...................`	545	100
AB575937.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 141	495	`...................`	513	100
AB575938.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 100	556	`...................`	574	100
AB575939.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 365	514	`...................`	532	100
AB575941.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 248	522	`...................`	540	100
AB575942.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 369	517	`...................`	535	100
AB575948.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 101	540	`...................`	558	100
HQ891923.1	Human enterovirus 71 strain Shanghai 27-2009, complete genome	582	`...................`	600	100
HQ891924.1	Human enterovirus 71 strain Shanghai 28-2009, complete genome	582	`...................`	600	100
HQ891925.1	Human enterovirus 71 strain Shanghai 36-2009, complete genome	583	`...................`	601	100
HQ891925.1	Human enterovirus 71 strain Shanghai 36-2009, complete genome	6909	`..t.........a...g..`	6927	84
HQ891926.1	Human enterovirus 71 strain Shanghai 51-2009, complete genome	582	`...................`	600	100
HQ891927.1	Human enterovirus 71 strain Shanghai 64-2009, complete genome	582	`...................`	600	100
HQ891928.1	Human enterovirus 71 strain Shanghai 117-2009, complete genome	582	`...................`	600	100
HQ891929.1	Human enterovirus 71 strain Shanghai 118-2009, complete genome	582	`...................`	600	100
HQ269389.1	Human coxsackievirus A16 isolate XM-CA16-3560, complete genome	586	`...................`	604	100
HQ400942.1	Human enterovirus 71 HZ08/Hangzhou/2008, complete genome	581	`...................`	599	100
HQ423141.1	Human coxsackievirus A16 strain KMM/08, complete genome	586	`...................`	604	100
HQ423142.1	Human enterovirus 71 strain KMM/09, complete genome	581	`...................`	599	100
HQ423143.1	Human enterovirus 71 strain KM186/09, complete genome	581	`...................`	599	100
HQ456305.1	Human enterovirus A strain GZ2010-156, complete genome	581	`...................`	599	100
HQ456306.1	Human enterovirus A strain GZ2010-134, complete genome	581	`...................`	599	100
HQ456306.1	Human enterovirus A strain GZ2010-134, complete genome	6907	`..t.........a...g..`	6925	84
HQ456307.1	Human enterovirus A strain GZ2010-120, complete genome	581	`...................`	599	100
HQ456307.1	Human enterovirus A strain GZ2010-120, complete genome	6907	`..t.........a...g..`	6925	84
HQ456308.1	Human enterovirus A strain GZ2010-118, complete genome	581	`...................`	599	100
HQ456309.1	Human enterovirus A strain GZ08-831, complete genome	581	`...................`	599	100
HQ456310.1	Human enterovirus A strain GZ08-530, complete genome	581	`...................`	599	100
HQ456312.1	Human enterovirus A strain GZ08-520, complete genome	581	`...................`	599	100
HQ456313.1	Human enterovirus A strain GZ2010-95, complete genome	581	`...................`	599	100
HQ611148.1	Human enterovirus 71 strain AH08/06, complete genome	581	`...................`	599	100
HQ611148.1	Human enterovirus 71 strain AH08/06, complete genome	6907	`..t.........a...g..`	6925	84
AF499635.1	Human coxsackievirus A1 strain Tompkins, complete genome	580	`.................._`	597	94
DQ341368.1	Human enterovirus 71 isolate MY104-9-SAR-97, complete genome	585	`.................._`	602	94
EU414334.1	Human enterovirus 71 strain PLday4-CH-06, complete genome	582	`.................._`	599	94
EU414335.1	Human enterovirus 71 strain PLday1-CH-06, complete genome	582	`.................._`	599	94
AB575915.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 944	531	`.................._`	548	94
AB575936.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 961	522	`.................._`	539	94
AY928383.1	Human poliovirus 1 isolate d261-2002037607 polyprotein gene, complete	578	`.a.................`	596	94
EF456706.1	Human poliovirus 1 isolate 7/b/97 nonfunctional polyprotein gene, com	531	`.....g.............`	549	94
X54521.1	Swine vesicular disease virus complete genomic RNA	582	`....a..............`	600	94
D16364.1	SVDMPS Swine vesicular disease virus gene for polyprotein, complete cd	583	`....a..............`	601	94
D00435.1	SVDG Swine vesicular disease virus (STRAIN H/3 '76) genomic RNA, compl	583	`....a..............`	601	94
AF029859.2	Echovirus 1 (strain Farouk / ATCC VR-1038) polyprotein precursor, gen	584	`.a.................`	602	94
AF268065.1	Swine vesicular disease virus strain NET/1/92, complete genome	583	`....a..............`	601	94
AY752945.1	Human coxsackievirus B3 strain 0, complete genome	583	`...............t...`	601	94
AY875692.1	Human coxsackievirus B5 isolate 2000/CSF/KOR, complete genome	586	`................g..`	604	94
AY875692.1	Human coxsackievirus B5 isolate 2000/CSF/KOR, complete genome	2700	`_____..g.........._`	2712	63
EU887278.1	Swine vesicular disease virus SVDV01, complete genome	583	`....a..............`	601	94
EU887279.1	Swine vesicular disease virus SVDV02, complete genome	583	`....a..............`	601	94
EU887280.1	Swine vesicular disease virus SVDV03, complete genome	583	`....a..............`	601	94
GU109481.1	Human coxsackievirus B3 strain SSM-CVB3, complete genome	583	`.......c...........`	601	94
GU109481.1	Human coxsackievirus B3 strain SSM-CVB3, complete genome	6883	`___...a.........g..`	6898	73
GU109481.1	Human coxsackievirus B3 strain SSM-CVB3, complete genome	6362	`__....ca.........__`	6376	68
AB501330.1	Human echovirus 13 gene for polyprotein, complete cds, strain: 2002-2	584	`................g..`	602	94
AB501331.1	Human echovirus 13 gene for polyprotein, complete cds, strain: I5(1)-	584	`................g..`	602	94
AF316321.2	Enterovirus 5865/sin/000009, complete genome	585	`................g..`	603	94
AF352027.1	Enterovirus 5666/sin/002209, complete genome	585	`................g..`	603	94
DQ341365.1	Human enterovirus 71 isolate PP37-MAL-01, complete genome	585	`.a.................`	603	94
FJ828519.1	Human enterovirus 71 isolate BJ08, complete genome	560	`.................g.`	578	94
AB575917.1	Human enterovirus 71 gene for polyprotein, complete cds, isolate: 101	537	`.............a.....`	555	94
HQ456311.1	Human enterovirus A strain GZ08-522, complete genome	581	`..............g....`	599	94
JN001860.1	Human enterovirus 71 strain NB/2010/01, complete genome	582	`..t................`	600	94
AY302544.1	Human echovirus 19 strain Burke complete genome	583	`......a.........g..`	601	89
AY896763.1	Human enterovirus B strain CBV3-18219-02 from Moldova polyprotein gen	559	`...........________`	569	57

VIRsiRNAdb

Database of Viral siRNA / shRNA